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mkdir ~/boot
cd ~/boot

Grab a copy of win98seboot.img

Create a blank 2.88MB floppy image and format as FAT12

dd if=/dev/zero of=floppy.img bs=1024 count=2880
mkdosfs -vvv floppy.img

Launch dosbox

dosbox

Within dosbox, mount the directory containing the images, and issue a boot command.

mount c ~/boot
c:
boot win98s~1.img floppy.img

After win98seboot boots, you will be dropped to a prompt. Copy the system over to the B: disk

sys b:

All done!